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the PDA spectra were characteristic for either flavones or isoflavones, both known to be present in the Fabaceae family. The highresolution MS data gained from the UHPLC-PDA-TOFMS analysis provided molecular formula information for all detected LC peaks giving a first overview of the extract composition. This preliminary structural information was later used in combination with the bioassay results for the dereplication of the bioactive constituents. Determination of Generic Parameters for Microfractionation In order to rapidly determine which compounds were responsible for the bioactivity of the enriched extract, a microfractionation strategy was developed to enable the acquisition of fractions in 96-well plate format with sufficient quantities 3 Microscale Natural Product Discovery in Zebrafish both for bioactivity testing and for structural elucidation of the bioactive compounds at the analytical level, starting with only a few milligrams of extract. According to the sensitivity of the zebrafish anti-angiogenic assay which was deduced from several known anti-angiogenic compounds with a range of in vivo potencies in zebrafish including SU5416 and emodin, it was MedChemExpress BX 912 estimated that the microfractionation procedure should yield at least 1 mg per well for an initial tracking of the anti-angiogenic activity over the entire chromatogram. On the other hand, since compound identification was foreseen based on microflow 1H NMR, it was necessary to keep a minimum of 5 mg for further dereplication. In addition, as the bioassay is carried out in a 96well plate format that includes controls, the number of fractions had ideally to be 90 or a multiple thereof. In order to obtain 510 mg per microfraction, it was estimated that 1.5 mg of enriched extract would be required. The loading was multiplied by a factor of 10 to ensure that most of the activity could be assessed and minor bioactive constituents could be detected, factoring in the recovery of a given metabolite through microfractionation on reversed phase columns is, 70%. It was thus estimated that 20 mg of enriched extract would be sufficient for the entire microfractionation procedure and a column with an adapted loading capacity was selected. To minimize sample handling, fractions were collected directly into 96-deepwell 22430212 plates, facilitating the subsequent drying of all samples at once by vacuum centrifugation, whereas a maximum volume of 1.2 mL of eluent per well had to be respected. A column geometry of 250610 mm was found to be a good compromise between loading capacity, HPLC resolution and microfraction 17496168 volumes. In order to fill the deepwells with adequate eluent volumes and collect peaks with sufficient resolution, a fraction collection time of 30 sec and a flow rate of 2.3 mL/min were chosen. Based on the gradient time constraints of the microfractionation procedure, corresponding gradient time and flow rate were calculated for the analytical UHPLC. This was necessary to optimize the gradient for the separation of the NPs in a specific extract at the analytical scale. For a good predictability of the separation efficiency between UHPLC and semi-preparative HPLC, the same phase chemistry and columns geometries with similar theoretical peak capacities were chosen. All of these steps are generic, as the procedure is adaptable for any medium-polar extract compatible with RP separation. Separation Optimization Specific to Rhynchosia viscosa and Microfractionation Since all generic parameters w

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Author: PDGFR inhibitor